Source code for chemicalchecker.tool.targetmate.ml

"""TargetMate ML classes"""
import pickle
import os
from chemicalchecker.util import logged
from .base import StackedModel


[docs]def tm_from_disk(tm): if type(tm) != str: return tm with open(tm, "rb") as f: tm = pickle.load(f) return tm
[docs]@logged class TargetMateStackedClassifier(StackedModel): """Stacked predictions""" def __init__(self, **kwargs): StackedModel.__init__(self, is_classifier=True, **kwargs) def on_disk_tmp(self): path = os.path.join(self.tmp_path, "tmp_tm.pkl") self.__log.info("Writing model to %s" % path) with open(path, "wb") as f: pickle.dump(self, f) return path def on_disk(self): path = os.path.join(self.models_path, "tm.pkl") self.__log.info("Writing model to %s" % path) with open(path, "wb") as f: pickle.dump(self, f) return path def on_disk_complete_model(self): # Added by Paula: path = os.path.join(self.models_path, "tm.pkl") self.__log.info("Writing model to %s" % path) with open(path, "wb") as f: pickle.dump(self, f) return path