chemicalchecker.util.plot.multiccplot.MultiCCPlot

class MultiCCPlot(chemcheckers, names, plot_path, limit_dataset=None)

Bases: object

MultiCCPlot class.

Produce Chemical Checker plots using multiple datasets.

Initialize a MultiCCPlot instance.

Parameters:

• chemcheckers (list) – List of CC instances.

• names (list) – List of CC instances names.

• plot_path (str) – Destination folder for plot images.

• limit_dataset (list) – Limit plot to these datasets. If None all datasets are used.

Methods

cc_palette	Return a list of colors a.k.a.
cmap_discretize	Return a discrete colormap from the continuous colormap cmap.
sign2_node2vec_stats	Plot the stats for sign2.

cc_palette(coords)

Return a list of colors a.k.a. a palette.

cmap_discretize(cmap, N)

Return a discrete colormap from the continuous colormap cmap.

cmap: colormap instance, eg. cm.jet. N: number of colors.

Example

x = resize(arange(100), (5,100)) djet = cmap_discretize(cm.jet, 5) imshow(x, cmap=djet)

sign2_node2vec_stats()

Plot the stats for sign2.